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Results tagged with vcf
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user 6251
VCF, acronym for Variant Calling Format, is a text file type used to store information regarding genetic variants.
7
votes
Accepted
How is the GT field in a VCF file defined?
"1/1") In *.Vcf File Represent? … Difference between 0/0 and ./. for genotype in VCF
1/2 in VCF genotype field? …
- 841
2
votes
Produce .vcf file of ALL mutations in .bam file
Ensure that the variant caller stringency is relaxed all the way. For example in freebayes use --min-alternate-count 1 --min-alternate-fraction 0 .
- 841