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STACKS process_radtags for demultiplexing RAD-seq data returning 57.5% "barcode not found" drops, retaining only 41.2% of reads

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How to remove third codon positions from a charset in iqtree?

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BioID SAINT downstream analysis

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Combining SCTransform, FindIntegrationAnchors, and Harmony

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Jichen Wen
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What algorithm should I use to find what RNA sequence/structural elements lead to different labelled MFE values?

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Getting all promoters of a specific gene

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Arbovirus phylogenetic analysis using the BEAST2 software via a global clock model

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calculate mismatch frequency/rate from a BAM file

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Will using smaller kmers help get larger contigs? If not, then what?

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Jalview interface issues

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Getting organism information from the ENA API

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ChimeraX AlphaFold3 prediction pseudobond naming

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Choosing between Intel and AMD for bioinformatics and molecular dynamics workflows on Linux

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GRaNIE package: the output contains the wrong rat genome assembly

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